MRIQC: individual T1w report

Summary

Subject ID: 131221107524316611430000019100315020703300001580.
Date and time: 2019-10-03, 15:34.
MRIQC version: 0.11.0.
Workflow details:
- File has no metadata (sidecar JSON file missing or empty)

Visual reports

Zoomed-in (brain mask)

Background noise

Extracted Image Quality Metrics (IQMs)

cjv			0.3657836183200023
cnr			3.5398539276592453
efc			0.46101521136598606
fber			4660.03369140625
fwhm	avg		3.4330033333333336
fwhm	x		3.38398
fwhm	y		3.40728
fwhm	z		3.50775
icvs	csf		0.19089540919915474
icvs	gm		0.43482133837564435
icvs	wm		0.37428325242520094
inu	med		1.2338299751281738
inu	range		0.34339863061904885
qi	1		0.0010822795865722253
qi	2		0.002461063419715275
rpve	csf		33.34446536287002
rpve	gm		15.85289096598348
rpve	wm		22.116887574945856
size	x		176
size	y		256
size	z		256
snr	csf		0.80035744919435
snr	gm		9.974332809310066
snr	total		9.963294541733502
snr	wm		19.11519336669609
snrd	csf		41.004455798143105
snrd	gm		71.02904503884588
snrd	total		71.62812022625666
snrd	wm		102.850859841781
spacing	x		1.0
spacing	y		1.0
spacing	z		1.0
summary	bg	k	123.0063715675422
summary	bg	mad	6.36971378326416
summary	bg	mean	9.942806243896484
summary	bg	median	8.389897346496582
summary	bg	n	3073817.0
summary	bg	p05	0.0
summary	bg	p95	24.29854469299316
summary	bg	stdv	10.443592071533203
summary	csf	k	4.405541532226459
summary	csf	mad	178.86373901367188
summary	csf	mean	519.2256469726562
summary	csf	median	398.67523193359375
summary	csf	n	6404.0
summary	csf	p05	140.63579635620118
summary	csf	p95	1891.6148986816404
summary	csf	stdv	498.08258056640625
summary	gm	k	0.11330957070158876
summary	gm	mad	67.0702896118164
summary	gm	mean	689.9955444335938
summary	gm	median	690.59619140625
summary	gm	n	17617.0
summary	gm	p05	573.1464477539063
summary	gm	p95	802.6388793945313
summary	gm	stdv	69.23536682128906
summary	wm	k	0.9869925326772084
summary	wm	mad	46.101295471191406
summary	wm	mean	996.093994140625
summary	wm	median	999.9910888671875
summary	wm	n	160868.0
summary	wm	p05	901.4456573486328
summary	wm	p95	1074.6611328125
summary	wm	stdv	52.313777923583984
tpm	overlap	csf	0.20253506302833557
tpm	overlap	gm	0.496695876121521
tpm	overlap	wm	0.5532912611961365
wm2max			0.4164113376394881

Provenance information

md5sum	06f99d7c7d227d94eb7146d4db3804aa
software	mriqc
version	0.11.0

Rate Image

Rating	Count
Invalid
Exclude
Usable
Good

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.